Type is a string that can be of three typesĮxtensionName is the name of the extension and is a stringĮxtension is the function that represents the implemented functionality, which should be called from cytoscape.Įxample of registration of a Layout import Random from "./algorithm/layout" export * from ". Registering an extension is done in the same way for all extensions cytoscape(type, extensionName, Extension) Register extensionĪll extension types once created (as will be described shortly) must be registered in cytoscape. With npm run buildonly the current build will be created. With npm run dev the development mode starts and therefore the build will be updated with each save Note that the same objectives can be achieved with other technologies, but a choice had to be made and this is mine □ Webpack: to have a build with only one bundle of type js to allow a build on each save (you can configure it better, putting it every certain saves, every certain milliseconds from a save).TypeScript: for a much more comfortable development.Let’s start from the already created base project that you can find on GitHub, I won’t spend many words here. add extension to Cytoscape, through e(ExtensionName).Inside the application that will use the extension write the code to be able to register the functionality in cytoscape.write the code that implements the functionality.Create an Extensionįor each type of extension ( core, collection, layout) a boilerplate has been created that you can use. Click on the full options or shorthand options to show how these options are supposed to be used. Options The options for the manipulation module have to be contained in an object titled manipulation. Does the animation, zooming and focusing. Now it’s up to you to decide what to do, if you want you can go directly to the code, or continue reading this article, which explains how it was created. Cytoscape Web development is funded by Genome Canada, through the Ontario Genomics Institute (2007-OGI-TD-05). Network - manipulation Acts as the camera that looks on the canvas. In this article, the goal is to provide a valid way to create usable extensions in Cytoscape.Īt this point, here there is the repository in which you can find the base code for every extension divided into branches.
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